I'm sorry, but why and how is this a debate question. Asking if molecules can be changed into atoms is as silly as asking is a car can be changed into autoparts.
Molecules are groups of atoms!
In fact, a common procedure known as electrolysis is used to separate water molecules into their fundamental atomic elements of hydrogen and oxygen. This procedure is one of the great hopes for developing a hydrogen fuel economy.
According to Wikipedia:
"Electrolysis of water can be observed by passing direct current from a battery or other DC power supply through a cup of water (in practice a saltwater solution increases the reaction intensity making it easier to observe). Using platinum electrodes, hydrogen gas will be seen to bubble up at the cathode, and oxygen will bubble at the anode. If other metals are used as the anode, there is a chance that the oxygen will react with the anode instead of being released as a gas. For example, using iron electrodes in a sodium chloride solution electrolyte, iron oxide will be produced at the anode, which will react to form iron hydroxide. When producing large quantities of hydrogen, this can significantly contaminate the electrolytic cell - which is why iron is not used for commercial electrolysis.
"The energy efficiency of water electrolysis varies widely. The efficiency is a measure of what fraction of electrical energy used is actually contained within the hydrogen. Some of the electrical energy is converted to heat, a useless by-product. Some reports quote efficiencies between 50% and 70%. This efficiency is based on the Lower Heating Value of Hydrogen. The Lower Heating Value of Hydrogen is thermal energy released when Hydrogen is combusted. This does not represent the total amount of energy within the Hydrogen, hence the efficiency is lower than a more strict definition. Other reports quote the theoretical maximum efficiency of electrolysis. The theoretical maximum efficiency is between 80% and 94%. The theoretical maximum considers the total amount of energy absorbed by both the hydrogen and oxygen. These values refer only to the efficiency of converting electrical energy into hydrogen's chemical energy. The energy lost in generating the electricity is not included. For instance, when considering a power plant that converts the heat of nuclear reactions into hydrogen via electrolysis, the total efficiency is more like 25%40%.
"About four percent of hydrogen gas produced worldwide is created by electrolysis, and normally used onsite. Hydrogen is used for the creation of ammonia for fertilizer via the Haber process, and converting heavy petroleum sources to lighter fractions via hydrocracking."
Obviously, molecules are broken down to their constituent atoms on an embarrassingly regular basis. To suggest that this question is even up for debate is laughable and suggests to me that the West and specifically the United States is well passed her peak as a leading nation for scientific and technological innovations.